spatial data file Search Results


raw visium spatial transcriptomics data  (Spatial Transcriptomics Inc)
86
Spatial Transcriptomics Inc raw visium spatial transcriptomics data
(A–C) UMAP plots of <t>Visium</t> spatial spots from SCC samples. (A) Spots colored by sample origin. (B) Spots labeled by spatial zones (core, edge, surrounding). (C) Grouped zones highlight transcriptomic patterns at tumor boundaries. (D) Heatmap showing spatial proximity among tumor zones. Higher intensity indicates closer spatial interaction, illustrating SCC microenvironment organization. (E) Ligand–receptor analysis identifies fibroblast-derived SFRP2 interacting with LRP5/6, suggesting Wnt signaling activation. (F) Spatial maps of SFRP2⁺ fibroblasts and Wnt signaling scores in SCC. Enrichment in tumor cores and interfaces points to fibroblast-driven modulation of the tumor niche.
Raw Visium Spatial Transcriptomics Data, supplied by Spatial Transcriptomics Inc, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/raw visium spatial transcriptomics data/product/Spatial Transcriptomics Inc
Average 86 stars, based on 1 article reviews
raw visium spatial transcriptomics data - by Bioz Stars, 2026-06
86/100 stars
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sbt mcd files  (Visiopharm AS)
90
Visiopharm AS sbt mcd files
(A–C) UMAP plots of <t>Visium</t> spatial spots from SCC samples. (A) Spots colored by sample origin. (B) Spots labeled by spatial zones (core, edge, surrounding). (C) Grouped zones highlight transcriptomic patterns at tumor boundaries. (D) Heatmap showing spatial proximity among tumor zones. Higher intensity indicates closer spatial interaction, illustrating SCC microenvironment organization. (E) Ligand–receptor analysis identifies fibroblast-derived SFRP2 interacting with LRP5/6, suggesting Wnt signaling activation. (F) Spatial maps of SFRP2⁺ fibroblasts and Wnt signaling scores in SCC. Enrichment in tumor cores and interfaces points to fibroblast-driven modulation of the tumor niche.
Sbt Mcd Files, supplied by Visiopharm AS, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/sbt mcd files/product/Visiopharm AS
Average 90 stars, based on 1 article reviews
sbt mcd files - by Bioz Stars, 2026-06
90/100 stars
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canmap streetfile 6.0  (DMTI Spatial)
90
DMTI Spatial canmap streetfile 6.0
(A–C) UMAP plots of <t>Visium</t> spatial spots from SCC samples. (A) Spots colored by sample origin. (B) Spots labeled by spatial zones (core, edge, surrounding). (C) Grouped zones highlight transcriptomic patterns at tumor boundaries. (D) Heatmap showing spatial proximity among tumor zones. Higher intensity indicates closer spatial interaction, illustrating SCC microenvironment organization. (E) Ligand–receptor analysis identifies fibroblast-derived SFRP2 interacting with LRP5/6, suggesting Wnt signaling activation. (F) Spatial maps of SFRP2⁺ fibroblasts and Wnt signaling scores in SCC. Enrichment in tumor cores and interfaces points to fibroblast-driven modulation of the tumor niche.
Canmap Streetfile 6.0, supplied by DMTI Spatial, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/canmap streetfile 6.0/product/DMTI Spatial
Average 90 stars, based on 1 article reviews
canmap streetfile 6.0 - by Bioz Stars, 2026-06
90/100 stars
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geodatabase file  (Esri inc)
90
Esri inc geodatabase file
(A–C) UMAP plots of <t>Visium</t> spatial spots from SCC samples. (A) Spots colored by sample origin. (B) Spots labeled by spatial zones (core, edge, surrounding). (C) Grouped zones highlight transcriptomic patterns at tumor boundaries. (D) Heatmap showing spatial proximity among tumor zones. Higher intensity indicates closer spatial interaction, illustrating SCC microenvironment organization. (E) Ligand–receptor analysis identifies fibroblast-derived SFRP2 interacting with LRP5/6, suggesting Wnt signaling activation. (F) Spatial maps of SFRP2⁺ fibroblasts and Wnt signaling scores in SCC. Enrichment in tumor cores and interfaces points to fibroblast-driven modulation of the tumor niche.
Geodatabase File, supplied by Esri inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/geodatabase file/product/Esri inc
Average 90 stars, based on 1 article reviews
geodatabase file - by Bioz Stars, 2026-06
90/100 stars
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esri shapefile  (Esri inc)
90
Esri inc esri shapefile
(A–C) UMAP plots of <t>Visium</t> spatial spots from SCC samples. (A) Spots colored by sample origin. (B) Spots labeled by spatial zones (core, edge, surrounding). (C) Grouped zones highlight transcriptomic patterns at tumor boundaries. (D) Heatmap showing spatial proximity among tumor zones. Higher intensity indicates closer spatial interaction, illustrating SCC microenvironment organization. (E) Ligand–receptor analysis identifies fibroblast-derived SFRP2 interacting with LRP5/6, suggesting Wnt signaling activation. (F) Spatial maps of SFRP2⁺ fibroblasts and Wnt signaling scores in SCC. Enrichment in tumor cores and interfaces points to fibroblast-driven modulation of the tumor niche.
Esri Shapefile, supplied by Esri inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/esri shapefile/product/Esri inc
Average 90 stars, based on 1 article reviews
esri shapefile - by Bioz Stars, 2026-06
90/100 stars
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spatial data file  (Biotechnology Information)
86
Biotechnology Information spatial data file
(A–C) UMAP plots of <t>Visium</t> spatial spots from SCC samples. (A) Spots colored by sample origin. (B) Spots labeled by spatial zones (core, edge, surrounding). (C) Grouped zones highlight transcriptomic patterns at tumor boundaries. (D) Heatmap showing spatial proximity among tumor zones. Higher intensity indicates closer spatial interaction, illustrating SCC microenvironment organization. (E) Ligand–receptor analysis identifies fibroblast-derived SFRP2 interacting with LRP5/6, suggesting Wnt signaling activation. (F) Spatial maps of SFRP2⁺ fibroblasts and Wnt signaling scores in SCC. Enrichment in tumor cores and interfaces points to fibroblast-driven modulation of the tumor niche.
Spatial Data File, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/spatial data file/product/Biotechnology Information
Average 86 stars, based on 1 article reviews
spatial data file - by Bioz Stars, 2026-06
86/100 stars
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dmti arcview street file data set for bc, canmap streetfiles version 2006.3  (DMTI Spatial)
90
DMTI Spatial dmti arcview street file data set for bc, canmap streetfiles version 2006.3
(A–C) UMAP plots of <t>Visium</t> spatial spots from SCC samples. (A) Spots colored by sample origin. (B) Spots labeled by spatial zones (core, edge, surrounding). (C) Grouped zones highlight transcriptomic patterns at tumor boundaries. (D) Heatmap showing spatial proximity among tumor zones. Higher intensity indicates closer spatial interaction, illustrating SCC microenvironment organization. (E) Ligand–receptor analysis identifies fibroblast-derived SFRP2 interacting with LRP5/6, suggesting Wnt signaling activation. (F) Spatial maps of SFRP2⁺ fibroblasts and Wnt signaling scores in SCC. Enrichment in tumor cores and interfaces points to fibroblast-driven modulation of the tumor niche.
Dmti Arcview Street File Data Set For Bc, Canmap Streetfiles Version 2006.3, supplied by DMTI Spatial, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/dmti arcview street file data set for bc, canmap streetfiles version 2006.3/product/DMTI Spatial
Average 90 stars, based on 1 article reviews
dmti arcview street file data set for bc, canmap streetfiles version 2006.3 - by Bioz Stars, 2026-06
90/100 stars
  Buy from Supplier
geospatial data files  (DMTI Spatial)
90
DMTI Spatial geospatial data files
(A–C) UMAP plots of <t>Visium</t> spatial spots from SCC samples. (A) Spots colored by sample origin. (B) Spots labeled by spatial zones (core, edge, surrounding). (C) Grouped zones highlight transcriptomic patterns at tumor boundaries. (D) Heatmap showing spatial proximity among tumor zones. Higher intensity indicates closer spatial interaction, illustrating SCC microenvironment organization. (E) Ligand–receptor analysis identifies fibroblast-derived SFRP2 interacting with LRP5/6, suggesting Wnt signaling activation. (F) Spatial maps of SFRP2⁺ fibroblasts and Wnt signaling scores in SCC. Enrichment in tumor cores and interfaces points to fibroblast-driven modulation of the tumor niche.
Geospatial Data Files, supplied by DMTI Spatial, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/geospatial data files/product/DMTI Spatial
Average 90 stars, based on 1 article reviews
geospatial data files - by Bioz Stars, 2026-06
90/100 stars
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shapefile spatial data format  (Esri inc)
90
Esri inc shapefile spatial data format
(A–C) UMAP plots of <t>Visium</t> spatial spots from SCC samples. (A) Spots colored by sample origin. (B) Spots labeled by spatial zones (core, edge, surrounding). (C) Grouped zones highlight transcriptomic patterns at tumor boundaries. (D) Heatmap showing spatial proximity among tumor zones. Higher intensity indicates closer spatial interaction, illustrating SCC microenvironment organization. (E) Ligand–receptor analysis identifies fibroblast-derived SFRP2 interacting with LRP5/6, suggesting Wnt signaling activation. (F) Spatial maps of SFRP2⁺ fibroblasts and Wnt signaling scores in SCC. Enrichment in tumor cores and interfaces points to fibroblast-driven modulation of the tumor niche.
Shapefile Spatial Data Format, supplied by Esri inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/shapefile spatial data format/product/Esri inc
Average 90 stars, based on 1 article reviews
shapefile spatial data format - by Bioz Stars, 2026-06
90/100 stars
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r studio 3.6.3  (RStudio)
90
RStudio r studio 3.6.3
(A–C) UMAP plots of <t>Visium</t> spatial spots from SCC samples. (A) Spots colored by sample origin. (B) Spots labeled by spatial zones (core, edge, surrounding). (C) Grouped zones highlight transcriptomic patterns at tumor boundaries. (D) Heatmap showing spatial proximity among tumor zones. Higher intensity indicates closer spatial interaction, illustrating SCC microenvironment organization. (E) Ligand–receptor analysis identifies fibroblast-derived SFRP2 interacting with LRP5/6, suggesting Wnt signaling activation. (F) Spatial maps of SFRP2⁺ fibroblasts and Wnt signaling scores in SCC. Enrichment in tumor cores and interfaces points to fibroblast-driven modulation of the tumor niche.
R Studio 3.6.3, supplied by RStudio, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/r studio 3.6.3/product/RStudio
Average 90 stars, based on 1 article reviews
r studio 3.6.3 - by Bioz Stars, 2026-06
90/100 stars
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spatial data sources esri geoinformatik  (Esri inc)
90
Esri inc spatial data sources esri geoinformatik
(A–C) UMAP plots of <t>Visium</t> spatial spots from SCC samples. (A) Spots colored by sample origin. (B) Spots labeled by spatial zones (core, edge, surrounding). (C) Grouped zones highlight transcriptomic patterns at tumor boundaries. (D) Heatmap showing spatial proximity among tumor zones. Higher intensity indicates closer spatial interaction, illustrating SCC microenvironment organization. (E) Ligand–receptor analysis identifies fibroblast-derived SFRP2 interacting with LRP5/6, suggesting Wnt signaling activation. (F) Spatial maps of SFRP2⁺ fibroblasts and Wnt signaling scores in SCC. Enrichment in tumor cores and interfaces points to fibroblast-driven modulation of the tumor niche.
Spatial Data Sources Esri Geoinformatik, supplied by Esri inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/spatial data sources esri geoinformatik/product/Esri inc
Average 90 stars, based on 1 article reviews
spatial data sources esri geoinformatik - by Bioz Stars, 2026-06
90/100 stars
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arcgis 9.3.1  (Esri inc)
90
Esri inc arcgis 9.3.1
(A–C) UMAP plots of <t>Visium</t> spatial spots from SCC samples. (A) Spots colored by sample origin. (B) Spots labeled by spatial zones (core, edge, surrounding). (C) Grouped zones highlight transcriptomic patterns at tumor boundaries. (D) Heatmap showing spatial proximity among tumor zones. Higher intensity indicates closer spatial interaction, illustrating SCC microenvironment organization. (E) Ligand–receptor analysis identifies fibroblast-derived SFRP2 interacting with LRP5/6, suggesting Wnt signaling activation. (F) Spatial maps of SFRP2⁺ fibroblasts and Wnt signaling scores in SCC. Enrichment in tumor cores and interfaces points to fibroblast-driven modulation of the tumor niche.
Arcgis 9.3.1, supplied by Esri inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/arcgis 9.3.1/product/Esri inc
Average 90 stars, based on 1 article reviews
arcgis 9.3.1 - by Bioz Stars, 2026-06
90/100 stars
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Image Search Results


(A–C) UMAP plots of Visium spatial spots from SCC samples. (A) Spots colored by sample origin. (B) Spots labeled by spatial zones (core, edge, surrounding). (C) Grouped zones highlight transcriptomic patterns at tumor boundaries. (D) Heatmap showing spatial proximity among tumor zones. Higher intensity indicates closer spatial interaction, illustrating SCC microenvironment organization. (E) Ligand–receptor analysis identifies fibroblast-derived SFRP2 interacting with LRP5/6, suggesting Wnt signaling activation. (F) Spatial maps of SFRP2⁺ fibroblasts and Wnt signaling scores in SCC. Enrichment in tumor cores and interfaces points to fibroblast-driven modulation of the tumor niche.

Journal: bioRxiv

Article Title: Integrated Single-Cell and Spatial Transcriptomic Analysis Reveals an Aging-Associated Fibroblast Subtype Linked to Tumor Progression in Human Skin

doi: 10.1101/2025.07.09.663827

Figure Lengend Snippet: (A–C) UMAP plots of Visium spatial spots from SCC samples. (A) Spots colored by sample origin. (B) Spots labeled by spatial zones (core, edge, surrounding). (C) Grouped zones highlight transcriptomic patterns at tumor boundaries. (D) Heatmap showing spatial proximity among tumor zones. Higher intensity indicates closer spatial interaction, illustrating SCC microenvironment organization. (E) Ligand–receptor analysis identifies fibroblast-derived SFRP2 interacting with LRP5/6, suggesting Wnt signaling activation. (F) Spatial maps of SFRP2⁺ fibroblasts and Wnt signaling scores in SCC. Enrichment in tumor cores and interfaces points to fibroblast-driven modulation of the tumor niche.

Article Snippet: Raw Visium spatial transcriptomics data (BCL and FASTQ files) were processed using the SpaceRanger v1.3.1 pipeline (10x Genomics).

Techniques: Labeling, Derivative Assay, Activation Assay